ABOUT GPRO

GPRO Suite is a bioinformatic project developed and maintained by Biotechvana with the aim to provide Graphical User interface (GUI) customized solutions for omic data analysis in remote servers (the Cloud) or in the user PC.

The current version (2.n) includes six Client-Desktop applications and a server side infraestructure with distinct dependencies such as databases, scripts, and Command Line Interface (CLI) third party software allowing different pipelines and workflow combinations based on the State-of-the-Art. The applications have been designed with custom dedication of a particular omic theme. This is, "DeNovo characterization of new genomes and transcriptomes", "RNAseq studies", "analysis of variants", "Sequence analysis and editing", "Statistics and testing hypothesis", ·Data integration and annotation".

The six GPRO applications (the client side) and are Java applications that can be installed in any PC under the most common operating systems, MACOs, Windows and Linux.

The Server side infraestructure can be installed in remote servers (as a cloud resource) or in the user PC provided that it has RAM enough.

Of the six applications four of them (DeNovoSeq, VariantSeq, RNASeq and STATools) are coupled with the server side allowing the user to run and manage server side pipelines and workflows via user-friendly interfaces customized for specific topics. The two other applications (Worksheet and SeqEditor) work locally in the user PC but may have additional funtions and tools connected with the server side

Usage

The six Applications of the GPRO suite can be downloaded here. See also the manuals (links to the right) and the dependencies for usage detailed below.

GPRO Server Side

The six desktop applications have no dependencies excepting having Java installed in the PC where they are installed.

The server side needs a dedicated server or a personal computer (PC) powered with RAM and hard disk space enough, a Linux operating system, and several Complex dependencies (third party software, databases and scripts). We have deployed the server side infraestructure into docker container to facilitate its installation. For more details about the server side and for downloading an image of the docker, please visit the GPRO Server Side site

THE SUITE 2.n